Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., OmpA-like porin from Agrobacterium fabrum C58

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)

Query: 161 ESIKKALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDI 220
           E +   L  E+++  + + ++  ++ +RI   G F  GSA + P+FR L+++I   +   
Sbjct: 334 EKLMAFLQPEVDKKLVTLADVNGRLRVRINNSGLFTTGSADVSPQFRDLIQRIGGALAAE 393

Query: 221 PGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPL 280
             +  V G+TD   + +  + SNW LS  RA +V   + +    D   +   G AD+ P+
Sbjct: 394 KFRAVVIGYTDTVPIKTVEFPSNWHLSEARAKAVGDILSQFTGPD--AILTEGRADSDPI 451

Query: 281 GPNDTEAQRATNRRVEISIL 300
             N TE  R  NRR EI +L
Sbjct: 452 ADNKTEEGRQINRRTEIMVL 471