Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., flagellar motor protein from Rhodanobacter sp000427505 FW510-R12

 Score =  139 bits (351), Expect = 4e-38
 Identities = 76/246 (30%), Positives = 142/246 (57%), Gaps = 5/246 (2%)

Query: 1   MDLATLVGLIGGMAFVIMAMVLGGSIMMFV-DVVSVLIVVGGSVFVVLMKFEMGQFFGAA 59
           MDL +++G I     +I+  +L GS +  + +  + +IV  G+   +L++ +      A 
Sbjct: 1   MDLVSIIGTILAFVVIILGTILKGSTVGALWNAAAFVIVFAGTAAALLVQTQGKVLRHAF 60

Query: 60  KIAGKAFMFKADAPEDLIAKIVEMADAARKGGFLALE---EMEIPNPFMQKGIDLLVDGH 116
           K+    +      P DLI++IV  ++ +R+ G L LE   E E P+PF+ KG+ LLVDG 
Sbjct: 61  KMLSMIYRPPQHQPGDLISRIVGWSEISRRQGLLGLEPQIEAE-PDPFVSKGLQLLVDGG 119

Query: 117 DADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMDDPKSIG 176
           + + +R+ L+ D+   +     G +V+   G  +P +G+IG ++GL+A++ N+ DP  +G
Sbjct: 120 EPEAIRSVLEVDLETRESIDLAGAKVYEMAGIYSPTLGIIGAVMGLMAVMQNLADPSKLG 179

Query: 177 PAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDS 236
             +A A + T+YG  L+N+   P+A +L     ++T  R ++++G+++I  G NPR I++
Sbjct: 180 HGIAAAFVATIYGVALANLFMLPMAARLKGLISKQTRMREILIEGLVSIAQGDNPRQIEA 239

Query: 237 YLKNYL 242
            L+ Y+
Sbjct: 240 RLQGYV 245