Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Motility protein A from Xanthobacter sp. DMC5

 Score = 46.6 bits (109), Expect = 6e-10
 Identities = 35/175 (20%), Positives = 80/175 (45%), Gaps = 2/175 (1%)

Query: 75  DLIAKIVEMADAARKGGFLAL-EEMEIPNPFMQKGIDLLVDGHDADVVRATLQKDIVLTD 133
           ++ A I + A +A  G F +L ++ E+          +L+    +  + A ++++I    
Sbjct: 96  EIEAHIDDPASSALFGHFPSLLKDKELTQYICDYARLILIGNAKSHEIEALMEQEISTIK 155

Query: 134 ERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMD-DPKSIGPAMAVALLTTLYGAVL 192
           +  +K         +  PA+G+   ++G+V  +  +D  P+ +G  +  AL+ T  G   
Sbjct: 156 KHKTKAAGALGTVAEALPALGICAAVLGIVKAMGAIDQSPEILGHYIGSALIGTFVGIYS 215

Query: 193 SNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKNYLNASKR 247
           S  I  P+A K+   R+++     +    ++A  +G  P +   + +  ++A +R
Sbjct: 216 SYAIISPLAAKVKSTREKQCQPFIITKQALIAFMNGALPPIALEHGRKTISAGER 270