Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., flagellar motor stator protein MotA from Escherichia coli ECRC102

 Score = 46.2 bits (108), Expect = 8e-10
 Identities = 49/253 (19%), Positives = 103/253 (40%), Gaps = 26/253 (10%)

Query: 20  MVLGGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAAKIAGKAFM---FKADAPEDL 76
           ++ GGS+        ++I+ G  +   ++        G  K     F    +      DL
Sbjct: 19  LMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDL 78

Query: 77  IAKIVEMADAARKGGFLALEEMEIPNP--------------------FMQKGIDLLVDGH 116
           +A +  +   +R+ G  +LE  +I NP                    F+   + L++ GH
Sbjct: 79  LALLYRLMAKSRQMGMFSLER-DIENPRESEIFASYPRIIADSVMLDFIVDYLRLIISGH 137

Query: 117 -DADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMDDPKS- 174
            +   + A + ++I   +             GD  PA G++  ++G+V  L + D P + 
Sbjct: 138 MNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAE 197

Query: 175 IGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVI 234
           +G  +A A++ T  G +L+     P+A  L  +  + +   + +   +L+  +G  P + 
Sbjct: 198 LGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIA 257

Query: 235 DSYLKNYLNASKR 247
             + +  L +S+R
Sbjct: 258 VEFGRKTLYSSER 270