Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) from Variovorax sp. SCN45

 Score =  102 bits (255), Expect = 8e-27
 Identities = 79/264 (29%), Positives = 130/264 (49%), Gaps = 25/264 (9%)

Query: 15  QLDQWLNRIPFQTLPLI-EAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVEC 73
           ++D+ ++R     +PL+ +  +Y +  GGKR RP L+ +    LG         A+ VE 
Sbjct: 3   EVDRVISRRLDTGVPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTGEQRFNLAAVVEF 62

Query: 74  IHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGE 133
           IH  +L+HDD+  +D+  LRRG+ T +  F    ++L GD L + AF ++ + +      
Sbjct: 63  IHTATLLHDDV--VDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDAN------ 114

Query: 134 TQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIH--RNKTGALMRCAIRLG 191
              + ++Q LAEA+    +  G+ L L   +   SL+E   +   R+KT  L   + RL 
Sbjct: 115 --NMRVMQILAEATNV--IAEGEVLQLMNMHDA-SLDEAAYLRVIRSKTAKLFEASTRLA 169

Query: 192 ALAAGEKGRAMLPHLDR----YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKST 247
           A+ AG       P ++     Y +A+G AFQV DD+LD   D    GK  G D    K+T
Sbjct: 170 AVLAGTT-----PEVEEACATYGQALGTAFQVIDDVLDYAGDANETGKNVGDDLREGKTT 224

Query: 248 YPALLGLEGAQQKAHTLLQEALLA 271
            P +  ++        L++ A+ A
Sbjct: 225 LPLIFAMQRGTPAQSQLVRAAIEA 248