Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., polyprenyl synthetase family protein from Variovorax sp. OAS795

 Score =  105 bits (261), Expect = 2e-27
 Identities = 78/251 (31%), Positives = 124/251 (49%), Gaps = 25/251 (9%)

Query: 28  LPLI-EAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPA 86
           +PL+ +  +Y +  GGKR RP L+ +    LG         A+ VE IH  +L+HDD+  
Sbjct: 37  VPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTGEQRFNLAAVVEFIHTATLLHDDV-- 94

Query: 87  MDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEA 146
           +D+  LRRG+PT +  F    ++L GD L + AF ++ + +         + ++Q LAEA
Sbjct: 95  VDESTLRRGRPTANESFGNPASVLVGDFLYSRAFQMMLDAN--------NMRIMQILAEA 146

Query: 147 SGAQGMCLGQALDLAAENRLISLEELETIH--RNKTGALMRCAIRLGALAAGEKGRAMLP 204
           +    +  G+ L L   +   SL+E   +   R+KT  L   + RL A+ AG       P
Sbjct: 147 TNV--IAEGEVLQLMNMHDA-SLDEAAYLRVIRSKTAKLFEASTRLAAVLAGAT-----P 198

Query: 205 HLDR----YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQK 260
            ++     Y +A+G AFQV DD+LD   D    GK  G D    K+T P +  ++     
Sbjct: 199 EVEEACATYGQALGTAFQVIDDVLDYAGDAHETGKNVGDDLREGKTTLPLIFAMQRGSAD 258

Query: 261 AHTLLQEALLA 271
              L++ A+ A
Sbjct: 259 QAALVRAAIEA 269