Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., polyprenyl synthetase family protein from Variovorax sp. OAS795

 Score =  219 bits (558), Expect = 6e-62
 Identities = 125/262 (47%), Positives = 165/262 (62%), Gaps = 2/262 (0%)

Query: 32  EAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDE 91
           +AMRY +L GGKR RP LV    + +G   +     A A E IHAYSL+HDDLP+MD+D 
Sbjct: 42  DAMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRAACATELIHAYSLVHDDLPSMDNDV 101

Query: 92  LRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQG 151
           LRRGKPT H++F EA A+L GDALQ LAF +L          TQ + + + LA A+G+QG
Sbjct: 102 LRRGKPTVHVKFGEADALLAGDALQALAFELLTPEGNEIPAATQAL-LCRLLARAAGSQG 160

Query: 152 MCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAE 211
           M  GQA+DLA+    +  ++L  +HR KTGAL++ ++ +GA  A     A L  L  Y  
Sbjct: 161 MAGGQAIDLASVGMALDEDQLREMHRLKTGALLQGSVEMGAACAAAVTPAALNALRDYGA 220

Query: 212 AVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEALLA 271
           A+GLAFQV DDILD+ +D++TLGK  G D   +K TY +L GL+GA+ +A  LL EAL A
Sbjct: 221 AIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLWGLDGARAQARQLLAEALAA 280

Query: 272 LEAIPY-NTEHLEEFARYVVER 292
           LE     +T  L   A  VV+R
Sbjct: 281 LERSGLADTAALRALAHMVVDR 302