Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  209 bits (533), Expect = 5e-59
 Identities = 121/264 (45%), Positives = 161/264 (60%), Gaps = 4/264 (1%)

Query: 7   SYQQRNNQQLDQWLNRIPFQTLP--LIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDL 64
           +++Q     +++ L R      P  L +AMRY +L GGKR RP LV  T + +G   +  
Sbjct: 13  AWRQAQQDAVERALERWVSADAPAGLGDAMRYAVLDGGKRLRPLLVLATCEAVGGHAAAA 72

Query: 65  DTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILA 124
              A AVE IHAYSL+HDD+P MD+D LRRGKPT H+QF EA A+L GDALQ LAF +L 
Sbjct: 73  MRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDALQALAFELLV 132

Query: 125 EGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALM 184
            GD  + G+     + + LA A+GA GM  GQA+DLA+    +    LE +HR KTGAL+
Sbjct: 133 PGD-GSLGDAMSARLCRLLALAAGADGMAGGQAVDLASVGVALDQPALEAMHRRKTGALL 191

Query: 185 RCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELN 244
           + ++ +GA A G      L  L  Y   VGLAFQV DDILD+ +D+ TLGK  G D   +
Sbjct: 192 QASVTMGA-ATGSPSPQSLALLAEYGACVGLAFQVVDDILDVTADSATLGKTAGKDAAAD 250

Query: 245 KSTYPALLGLEGAQQKAHTLLQEA 268
           K T+ +L+GL  AQ  A  +L +A
Sbjct: 251 KPTFVSLMGLAQAQAYADRVLAQA 274