Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., polyprenyl synthetase family protein from Magnetospirillum magneticum AMB-1

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 76/226 (33%), Positives = 116/226 (51%), Gaps = 20/226 (8%)

Query: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100
           GGKR RP L   + ++ G         A+ VE IH  +L+HDD+  +D+ ELRRG+ + +
Sbjct: 58  GGKRLRPVLTLASAKLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASAN 115

Query: 101 IQFDEATAILTGDALQTLAFTILAE-GDLSAAGETQRVAMLQALAEASGAQGMCLGQALD 159
             F    ++L GD L + +F ++ E G LS         +L  L+ AS    +  G+ L 
Sbjct: 116 ALFGNKPSVLVGDFLFSRSFELMVEDGSLS---------VLAILSRASSV--IAEGEVLQ 164

Query: 160 LAAENRLISLEE--LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAF 217
           L   N   + E+  LE I R+KT AL   A R+GA+ A ++ +     L+ Y   +G+AF
Sbjct: 165 LITANDTETSEDSYLEVI-RSKTAALFAAACRIGAVVA-DRPKVEEEALESYGLNLGIAF 222

Query: 218 QVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLE--GAQQKA 261
           Q+ DD+LD  +    LGK  G D    K T P +L     G +++A
Sbjct: 223 QLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVILAFRRGGDEERA 268