Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  355 bits (910), Expect = e-103
 Identities = 178/283 (62%), Positives = 219/283 (77%), Gaps = 3/283 (1%)

Query: 13  NQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVE 72
           NQ L +++  +PFQ  P++EAM+YG LLGGKR RP+LVY TGQM G   + LD PA+AVE
Sbjct: 15  NQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVE 74

Query: 73  CIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAG 132
           CIHAYSLIHDDLPAMDDD+LRRG PTCHI+F EA AIL GDALQTLAF I+++  +    
Sbjct: 75  CIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVA 134

Query: 133 ETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGA 192
           +  R+AM+  LA ASG  GMC GQALDLAAE + I+L+ LE IHR+KTGAL+R A+RLGA
Sbjct: 135 DRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGA 194

Query: 193 LAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALL 252
           L+AG+KGR  LP LDRYAE++GLAFQVQDDILD++ DT TLGK QG+DQ+L KSTYPALL
Sbjct: 195 LSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL 254

Query: 253 GLEGAQQKAHTLLQEA---LLALEAIPYNTEHLEEFARYVVER 292
           GLE A+ KA  L+++A   L  L A   +T  LE  A Y+++R
Sbjct: 255 GLEQARNKARDLIEDARQSLHQLAAQSLDTSALEALANYIIQR 297