Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., geranyltranstransferase (NCBI) from Escherichia coli BW25113

 Score =  349 bits (895), Expect = e-101
 Identities = 172/293 (58%), Positives = 223/293 (76%), Gaps = 3/293 (1%)

Query: 3   EALSSYQQRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELS 62
           + L +  ++ NQ L +++  +PFQ  P++E M+YG LLGGKR RP+LVY TG M G   +
Sbjct: 5   QQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTN 64

Query: 63  DLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTI 122
            LD PA+AVECIHAYSLIHDDLPAMDDD+LRRG PTCH++F EA AIL GDALQTLAF+I
Sbjct: 65  TLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSI 124

Query: 123 LAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGA 182
           L++ D+    +  R++M+  LA ASG  GMC GQALDL AE + + L+ LE IHR+KTGA
Sbjct: 125 LSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGA 184

Query: 183 LMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQE 242
           L+R A+RLGAL+AG+KGR  LP LD+YAE++GLAFQVQDDILD++ DT TLGK QG+DQ+
Sbjct: 185 LIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQ 244

Query: 243 LNKSTYPALLGLEGAQQKAHTLLQEALLALEAI---PYNTEHLEEFARYVVER 292
           L KSTYPALLGLE A++KA  L+ +A  +L+ +     +T  LE  A Y+++R
Sbjct: 245 LGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQR 297