Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Geranylgeranyl pyrophosphate synthase from Enterobacter asburiae PDN3

 Score =  349 bits (895), Expect = e-101
 Identities = 179/285 (62%), Positives = 218/285 (76%), Gaps = 3/285 (1%)

Query: 11  RNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASA 70
           R N  L +++   PFQ   L+EAM YG LLGGKR RP+LVY TG M G   + LD PA+A
Sbjct: 13  RANDALRRFIAPQPFQNTLLVEAMHYGALLGGKRLRPFLVYATGNMFGISDNTLDAPAAA 72

Query: 71  VECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSA 130
           VECIHAYSLIHDDLPAMDDD+LRRG+PTCHI+F EA AIL GDALQTLAF+IL++  ++ 
Sbjct: 73  VECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMAE 132

Query: 131 AGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRL 190
             +  R+AM+  LA ASG  GMC GQALDL AE R ++LE+LE IHR+KTGAL+R A+RL
Sbjct: 133 VADRDRLAMISELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRSAVRL 192

Query: 191 GALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPA 250
           GAL+AGE+GR  LP LDRYAE++GLAFQVQDDILD++ DT TLGK QG+DQ+L KSTYPA
Sbjct: 193 GALSAGEQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252

Query: 251 LLGLEGAQQKAHTLLQEA---LLALEAIPYNTEHLEEFARYVVER 292
           LLGLE AQ+KA  L+ +A   L  L A   +T  LE  A Y+++R
Sbjct: 253 LLGLEQAQRKARDLIDDARQSLNELAAQSLDTSALEALADYIIQR 297