Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., polyprenyl synthetase family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  101 bits (252), Expect = 2e-26
 Identities = 86/268 (32%), Positives = 124/268 (46%), Gaps = 31/268 (11%)

Query: 28  LPLIEAMRYGLL-LGGKRARPYLVYITGQMLGCELSDLDTP---ASAVECIHAYSLIHDD 83
           +P+I  +   L+  GGKR RP +     + +G    D+  P   A+AVE IH  +L+HDD
Sbjct: 16  VPIIPKLAEHLVSAGGKRLRPLMTVAAARAVGAT-DDIVAPRKLAAAVEFIHTATLLHDD 74

Query: 84  LPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGD----LSAAGETQRVAM 139
           +  +D  ELRRGK   H+ +   T++L GD L   AF ++ E D    L    E  RV  
Sbjct: 75  I--VDASELRRGKVAAHLIWGAPTSVLVGDFLFARAFELMVETDSMRALGILAEASRVIS 132

Query: 140 LQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199
              + + + A  + L QA  L    ++IS          KT  L   A   GA+ AG   
Sbjct: 133 EGEVLQLTRAHDLNLDQATYL----QIISA---------KTAELFAAAAEAGAVGAGADP 179

Query: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQ 259
            A+    D Y  A+G+AFQ+ DD LD  +  E LGK  G D    K+T P LL +   + 
Sbjct: 180 AAIKALRD-YGMALGIAFQLADDALDYGATAEALGKNAGDDFNEGKATLPLLLAVARTRG 238

Query: 260 KAHTLLQEALLALEAIPYNTEHLEEFAR 287
           +     +  +   E  P      E+F R
Sbjct: 239 REEAFWERTVTKGERTP------EDFTR 260