Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., octaprenyl diphosphate synthase from Escherichia coli BL21

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 26/236 (11%)

Query: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100
           GGKR RP +  +  + +G E +   T A+ +E IH  +L+HDD+  +D+ ++RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 101 IQFDEATAILTGDALQTLAFTILAE-GDLSAAGETQRVAMLQALAEASGAQGMCLGQALD 159
             F  A ++L GD + T AF ++   G L          +L+ ++EA     +  G+ L 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGSLK---------VLEVMSEAVNV--IAEGEVLQ 149

Query: 160 LAAENRL-ISLEELETIHRNKTGALMRCAIRLGALAAG-----EKGRAMLPHLDRYAEAV 213
           L   N   I+ E    +  +KT  L   A +   + AG     EKG      L  Y   +
Sbjct: 150 LMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKG------LQDYGRYL 203

Query: 214 GLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEAL 269
           G AFQ+ DD+LD  +D E LGK  G D    K T P L  +     +   +++ A+
Sbjct: 204 GTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAI 259