Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Octaprenyl-diphosphate synthase from Alteromonas macleodii MIT1002

 Score =  104 bits (260), Expect = 2e-27
 Identities = 80/283 (28%), Positives = 143/283 (50%), Gaps = 20/283 (7%)

Query: 2   IEALSSYQQRNNQQLDQWLNRIPFQTLPLIEAMRYGLL-LGGKRARPYLVYITGQMLGCE 60
           I+ + +    + Q ++Q + +     + LI  + + ++  GGKR RP L  ++ + +G +
Sbjct: 5   IDQIRALSNDDMQAVNQLIQQQVDSDVALINQLGFYIVNSGGKRLRPLLTVLSARAMGID 64

Query: 61  LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
            +D  T A+ VE IH  +L+HDD+  +D+  +RRG+ T +  F    ++L GD L T +F
Sbjct: 65  NNDHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETANAIFGNQASVLVGDFLYTRSF 122

Query: 121 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEE--LETIHRN 178
            ++           +R+ +++ L+EA+    +  G+ L L   N   + E    + I+  
Sbjct: 123 QMMVS--------LKRMRVMEILSEATNQ--IAEGEVLQLMNCNDPSTTEARYFDVIY-G 171

Query: 179 KTGALMRCAIRLGALAAGEKGRAMLPH-LDRYAEAVGLAFQVQDDILDIISDTETLGKPQ 237
           KT  L   A +L A+   +     + H +  Y + +G AFQ+ DDILD ++D+E +GK  
Sbjct: 172 KTARLFEAATQLAAVLTDQNEH--IEHAMQEYGKHLGTAFQLADDILDYMADSEEMGKNA 229

Query: 238 GSDQELNKSTYPALLGLEGAQ-QKAHTLLQEALLALEAIPYNT 279
           G D    K T P L  +  A+      L+QEA+     +P+ T
Sbjct: 230 GDDLAEGKPTLPLLYAMWHARNDDDKALIQEAIEQSNGLPHLT 272