Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., octaprenyl-diphosphate synthase from Agrobacterium fabrum C58

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 19/273 (6%)

Query: 10  QRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPAS 69
           +R NQ +   L+R       + E   + +  GGKR RP L   +  M G E  +    A+
Sbjct: 29  ERVNQLI---LSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYEGDNHIKLAT 85

Query: 70  AVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLS 129
           +VE +H  +L+HDD+  +D+ +LRRGK T    +    ++L GD L   AF ++ +    
Sbjct: 86  SVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRMMVD---- 139

Query: 130 AAGETQRVAMLQALAEASGAQGMCL-GQALDLA-AENRLISLEELETIHRNKTGALMRCA 187
                  V  L AL   S A  +   G+ L L+ A+N   + ++   + R KT AL   A
Sbjct: 140 -------VGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAA 192

Query: 188 IRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKST 247
             +G + A +  +A    L  Y   +GLAFQ+ DD+LD    +  LGK  G D    K T
Sbjct: 193 AEVGPIVA-KTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKIT 251

Query: 248 YPALLGLEGAQQKAHTLLQEALLALEAIPYNTE 280
            P +L      Q      + A+   E+   N E
Sbjct: 252 LPVILSYRRGTQDERAFWRNAIEKGESSDENLE 284