Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) from Acinetobacter radioresistens SK82

 Score =  103 bits (257), Expect = 5e-27
 Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 19/258 (7%)

Query: 16  LDQWLNR-IPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLG-CELSDLDTPASAVEC 73
           +DQ++N  I  +   ++   ++ +  GGKR RP +  +     G   L      A+ +E 
Sbjct: 20  MDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGETNLKHAQKLAAIIEM 79

Query: 74  IHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGE 133
           +H  +L+HDD+  +D+  LRRG+PT +  ++  TA+L GD L   AF +L + D      
Sbjct: 80  LHTATLVHDDV--VDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLD------ 131

Query: 134 TQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEE--LETIHRNKTGALMRCAIRLG 191
                M+     ++G   +  G+ L L A+++  + E   L+ IH  KT  L   A    
Sbjct: 132 ----NMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEAVYLQIIH-GKTSRLFELATEGA 186

Query: 192 ALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPAL 251
           A+ AG+        L R+A   G AFQ+ DDILD  SD +TLGK  G D    K T P +
Sbjct: 187 AILAGKP--EYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLI 244

Query: 252 LGLEGAQQKAHTLLQEAL 269
             ++  Q +   L++ ++
Sbjct: 245 AAMQNTQGEQRDLIRRSI 262