Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., transketolase from Pseudomonas simiae WCS417

 Score = 55.5 bits (132), Expect = 8e-12
 Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 13/215 (6%)

Query: 326 GDFLCDMAAQDPKLMA----ITPAMREG---SGMVRFSKE-YPSQYFDVAIAEQHAVTLA 377
           G+ L   A Q P L+     ++P+ +      G  RFS + Y  +     I E     +A
Sbjct: 379 GEVLNAFAEQVPWLLGGSADLSPSTKTNLTFDGAGRFSADDYSGRNLHFGIREHAMGAIA 438

Query: 378 TGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDRAGI-VGADGQTHQGAFD 436
            G+A++   P  + +  F        I   AIM LPV+F      I VG DG THQ    
Sbjct: 439 NGLALSYLRPYTSTFLVFSDY-MKPPIRLAAIMELPVVFVFTHDSIGVGEDGPTHQPIEH 497

Query: 437 LSYMRCIPNMLIMAPADENECRQMLYTG-HQHQGPSAVRYPRGNGMGVELESSFTALEIG 495
           L+ +R  P +L + P D NE  ++      Q   PS V   R     ++      A    
Sbjct: 498 LTQLRATPGLLTLRPGDANETLELWKVALAQTHRPSCVVLSRQPLPTLDRTKYAAASGAA 557

Query: 496 KGRLMRESTACEGEKVAILSFGTLLPNALQAAEKL 530
           KG  +    A +  KV +L+ G+ +  A+ A E+L
Sbjct: 558 KGAYV--LAAADHPKVLLLATGSEVGLAVAAYEQL 590



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 9/56 (16%)

Query: 143 DRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLNDN---------EMSISENV 189
           D  V ++ GDG +  G++ EA + AG +  D L  + DN         E++ SE+V
Sbjct: 164 DYNVYTLCGDGDMMEGISGEAASLAGHLKLDKLCWIYDNNTISIEGHTELAFSEDV 219