Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) from Variovorax sp. SCN45

 Score =  732 bits (1890), Expect = 0.0
 Identities = 360/618 (58%), Positives = 462/618 (74%), Gaps = 5/618 (0%)

Query: 9   PTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYH 68
           P L   + P  +R   +  L +L DE+R  +L++VS++ GHL+S LGTVELTVALH+V++
Sbjct: 4   PLLPTLHDPAPIRKYDRTQLRQLSDEVRACVLDNVSRTGGHLSSNLGTVELTVALHHVFN 63

Query: 69  TPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSIS 128
           TP D L+WDVGHQ YPHKILTGRR++MPT+RQ  G+  FP R ESEYDT    HSSTSIS
Sbjct: 64  TPHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRSESEYDTFGTAHSSTSIS 123

Query: 129 AALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLNDNEMSISEN 188
           AALGMA+ A ++G+DR  V++IGDGA+TAGMAFEA+N+AG     +LV+LNDN+MSIS  
Sbjct: 124 AALGMAMAAKQKGEDRHTVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDNDMSISPP 183

Query: 189 VGALNNHLAQVLSGSLYTSIREGGKKVLSGIPPIKELVRRTEEHLKGMVVPGTLFEELGF 248
           VGALN +LAQ++SG+ Y + +  GK VL   PP+ EL +R E+H KGMVVP TLFE+ GF
Sbjct: 184 VGALNRYLAQLMSGNFYAAAKSVGKSVLRNAPPLFELAKRLEQHAKGMVVPATLFEQFGF 243

Query: 249 NYIGPVDGHDVLELIKTLKNMRELKGPQFLHVMTKKGKGYAPAEKDPIGYHGVPKFDPSH 308
           NY+GP+DGHD+  L+ TL+N++ L+GPQFLHV+T+KG+GY  AE DP+ YHG  KFDP  
Sbjct: 244 NYVGPIDGHDLDSLVPTLENLKHLEGPQFLHVVTRKGQGYKLAEADPVAYHGPGKFDPQV 303

Query: 309 HSLPKSSNTKPTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPSQYFDVAI 368
             +  ++  K TF+++FG +LCD AA D +L+ ITPAMREGSG+V F K +P++Y+DV I
Sbjct: 304 GLVKSTAPAKQTFTQVFGQWLCDTAAADGRLVGITPAMREGSGLVEFEKRFPARYYDVGI 363

Query: 369 AEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDRAGIVGADG 428
           AEQHAVT A G+A  G  P+VAIYSTFLQR YDQLIHDVAI NLPV+FA+DRAG+VGADG
Sbjct: 364 AEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFALDRAGLVGADG 423

Query: 429 QTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQHQGPSAVRYPRGNGMGVELESS 488
            TH GA+D+ ++RCIPNM I  PADE ECRQ+L + ++   P AVRYPRG G GV    +
Sbjct: 424 ATHAGAYDIPFLRCIPNMSIACPADERECRQLLTSAYEQSHPVAVRYPRGAGAGVAPHLT 483

Query: 489 FTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNATVADMRFVKPLDEALI 548
             AL +GKG + R     EG+++AIL+FGTLL  AL AAE L+ATV +MR+ KPLD  L+
Sbjct: 484 LDALPLGKGEIRR-----EGKRIAILAFGTLLYPALAAAESLDATVVNMRWAKPLDVELL 538

Query: 549 KQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLNLGLPDQFIVQGTQEEMHAE 608
            Q+A++HD +VTLEE AI GGAG+ V+E L     LKPVL LGLPDQFI  G   ++ A 
Sbjct: 539 LQVARSHDAIVTLEEGAIMGGAGSAVLEALQAANVLKPVLQLGLPDQFIEHGDPAKLLAG 598

Query: 609 LGLDGAGIERAIRDYLAK 626
           +GLD AGIE +I +   K
Sbjct: 599 IGLDAAGIEASIVERFGK 616