Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., 1-deoxy-D-xylulose-5-phosphate synthase (NCBI) from Escherichia coli BW25113

 Score =  961 bits (2485), Expect = 0.0
 Identities = 477/626 (76%), Positives = 541/626 (86%), Gaps = 7/626 (1%)

Query: 1   MTLDISKYPTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELT 60
           M+ DI+KYPTLAL ++  ELR LPKE LPKLCDELR YLL+SVS+SSGH ASGLGTVELT
Sbjct: 1   MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT 60

Query: 61  VALHYVYHTPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSV 120
           VALHYVY+TPFD LIWDVGHQAYPHKILTGRRD++ TIRQK GLHPFPWR ESEYD LSV
Sbjct: 61  VALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSV 120

Query: 121 GHSSTSISAALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLND 180
           GHSSTSISA +G+A+ A KEGK+R+ V VIGDGAITAGMAFEAMNHAGD+ PDMLV+LND
Sbjct: 121 GHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILND 180

Query: 181 NEMSISENVGALNNHLAQVLSGSLYTSIREGGKKVLSGIPPIKELVRRTEEHLKGMVVPG 240
           NEMSISENVGALNNHLAQ+LSG LY+S+REGGKKV SG+PPIKEL++RTEEH+KGMVVPG
Sbjct: 181 NEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPG 240

Query: 241 TLFEELGFNYIGPVDGHDVLELIKTLKNMRELKGPQFLHVMTKKGKGYAPAEKDPIGYHG 300
           TLFEELGFNYIGPVDGHDVL LI TLKNMR+LKGPQFLH+MTKKG+GY PAEKDPI +H 
Sbjct: 241 TLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA 300

Query: 301 VPKFDPSHHSLPKSSNTKPTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYP 360
           VPKFDPS   LPKSS   P++SKIFGD+LC+ AA+D KLMAITPAMREGSGMV FS+++P
Sbjct: 301 VPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFP 360

Query: 361 SQYFDVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDR 420
            +YFDVAIAEQHAVT A G+AI GY PIVAIYSTFLQR YDQ++HDVAI  LPV+FAIDR
Sbjct: 361 DRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDR 420

Query: 421 AGIVGADGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTG-HQHQGPSAVRYPRGN 479
           AGIVGADGQTHQGAFDLSY+RCIP M+IM P+DENECRQMLYTG H + GPSAVRYPRGN
Sbjct: 421 AGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGN 480

Query: 480 GMGVELESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNATVADMRF 539
            +GVEL +    L IGKG + R      GEK+AIL+FGTL+P A + AE LNAT+ DMRF
Sbjct: 481 AVGVEL-TPLEKLPIGKGIVKR-----RGEKLAILNFGTLMPEAAKVAESLNATLVDMRF 534

Query: 540 VKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLNLGLPDQFIVQ 599
           VKPLDEALI ++A +H+ LVT+EENAI GGAG+GV E LM  ++  PVLN+GLPD FI Q
Sbjct: 535 VKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQ 594

Query: 600 GTQEEMHAELGLDGAGIERAIRDYLA 625
           GTQEEM AELGLD AG+E  I+ +LA
Sbjct: 595 GTQEEMRAELGLDAAGMEAKIKAWLA 620