Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Rhodanobacter sp000427505 FW510-R12

 Score =  103 bits (258), Expect = 3e-27
 Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFP----LHRLDRPT 57
           L IV++DE+L+ ++KPAG++VH    +   T  +   L         P    +HRLD+ T
Sbjct: 82  LAIVHEDEHLLVLDKPAGLVVHPGAGNPAGT-LLNALLHHDPRLAELPRAGIVHRLDKDT 140

Query: 58  SGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADKFAK 117
           SG++V A +    + ++ + + HE+E+ Y A+V G +     +D P+   L     +  +
Sbjct: 141 SGLMVVARTLPTYTALVDLLSRHEVERQYEAVVLGTLVAGGTVDAPIGRSLGDRLRQAVR 200

Query: 118 QDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVG 177
            +++ + AVT YR   +              + L++ + +TGR HQ+R H+AH+ HP+VG
Sbjct: 201 DEEDGKRAVTHYRVRERFR-----------AHSLLQCRLETGRTHQIRVHLAHISHPLVG 249

Query: 178 DTTHGDGV------HNRLFREHFSAQRLMLHASELRFMHPYTQQPL 217
           D  +G G+         L       +R  LHA +L F+HP T + +
Sbjct: 250 DPLYGGGLKLPKGASAELAAALRGFRRQALHAEQLAFIHPATGEAM 295