Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Ribosomal large subunit pseudouridine synthase C from Xanthobacter sp. DMC5

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 23/207 (11%)

Query: 5   VYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVFA 64
           +++D+ ++ +NKP G+ V          + +++ L+D+ GQ    +HR+D+ TSG L+ A
Sbjct: 129 LFEDKDVMVLNKPFGLAVQGGSGTYRHVDGLLEALKDRDGQKPRLVHRIDKDTSGCLLIA 188

Query: 65  LSSQIASEVMPMFANHEMEKTYHAIVRGWIE--EANVLDYPLKEELDKIADKFAKQDKEA 122
            S   AS +   F + E  K Y A+V G  +  +  +  Y  ++E ++        + EA
Sbjct: 189 KSRLAASVLAKSFRSREARKVYWAVVPGVPKPRQGRISTYLARDEDEEKMRVARHGEDEA 248

Query: 123 QSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTHG 182
             A+T Y          A    A  +   + ++P TGR HQLR H+AH+ HPI+GD  + 
Sbjct: 249 SHAITYY----------AVVDQAAQKMSWLSLKPVTGRTHQLRAHLAHIHHPILGDPKYF 298

Query: 183 D--------GVHNRLFREHFSAQRLML 201
           D        G+ NRL   H  A+RL++
Sbjct: 299 DIENWELPGGLQNRL---HLLARRLVI 322