Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Sphingobium sp. HT1-2

 Score =  102 bits (255), Expect = 7e-27
 Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 20/241 (8%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSW--LDKHETEFVMQTLRDQ---IGQHVFP--LHRLD 54
           L+IV++D  L+ V+KPAG++VH +   LD      ++     Q   IG    P  +HR+D
Sbjct: 84  LDIVHEDADLIVVDKPAGLVVHPAAGNLDGTLVNALLHHCDGQLSGIGGVARPGIVHRID 143

Query: 55  RPTSGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADK 114
           + TSG+LV A S +    +   F +H +++ Y AIV G     +          D    K
Sbjct: 144 KDTSGLLVVAKSDKAHEGLARQFKDHSIDRLYAAIVYGIPAPGSGTVDAWIGRSDADRKK 203

Query: 115 FA-KQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRH 173
            A  ++   + AVT YR + ++               ++E + +TGR HQ+R HMAHL H
Sbjct: 204 MAVHREGRGKHAVTHYRVMERLR-----------GAAMVECRLETGRTHQVRVHMAHLGH 252

Query: 174 PIVGDTTHG-DGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLS 232
           P++GD  +G D    +   E    +R  LHA  L F+HP T++PL   + L    Q LLS
Sbjct: 253 PLIGDPVYGRDRKGFKSILETLGFKRQALHAKRLGFIHPVTEEPLAFDSPLPADMQELLS 312

Query: 233 E 233
           E
Sbjct: 313 E 313