Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., RNA pseudouridine synthase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  104 bits (259), Expect = 2e-27
 Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 25/228 (10%)

Query: 1   MLEIVYQDEYLVAVNKPAGMLVHRS-----WLDKHETEFVMQTLRDQIGQHVFPLHRLDR 55
           MLE++Y+D +++AVNKPAG+LVH        L     +++           +  +HRLDR
Sbjct: 1   MLEVLYEDNHVLAVNKPAGLLVHGDETGDITLAHLAKDYIRHKYNKPGNVFIGVVHRLDR 60

Query: 56  PTSGVLVFALSSQIASEVMPMFANHEMEKTYHAIV--RGWIEEANVLDYPLKEELDKIAD 113
           P SGV++ A +S+  + +  +F + +  KTY A+V  R   E+ N++ + +K+    +  
Sbjct: 61  PVSGVVLLAKTSKALTRLNELFRSKKTTKTYWAVVQNRPKQEQGNLVHWLVKDSSRNVTK 120

Query: 114 KFAKQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRH 173
            +AK++     +   YR L+     +  GK       L+E+ P TGR HQ+R  ++ +R 
Sbjct: 121 AYAKENPAGSRSELNYRLLS-----MQHGKH------LLEVNPITGRPHQIRVQLSSMRC 169

Query: 174 PIVGDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRA 221
           PI+GD  +G         +    + + LHA  L+F HP  + P+ + A
Sbjct: 170 PILGDLKYGAD-------QPLPDKSIALHARRLQFDHPTLKTPVTVSA 210