Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  114 bits (286), Expect = 2e-30
 Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 4   IVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVF 63
           +V++DE  +A++KPAG+ VH            M+  R Q  + +  +HRLDR TSG+L+ 
Sbjct: 94  VVFEDEAFLAIDKPAGVAVHGGSGVSFGVIEQMRQARPQ-ARLLELVHRLDRETSGLLLI 152

Query: 64  ALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEEANVLDYPLKEELDKIADKFAK----Q 118
           A        +   F   E  KTY A+V+G W     VLD PL + L    ++  +     
Sbjct: 153 AKKKSALKALQDQFRERETGKTYLALVKGVWPARLKVLDQPLHKYLLPDGERRVRVTTPD 212

Query: 119 DKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGD 178
           D +   +VT  +   +V  P      A   + L+E+  KTGR HQ+R H++   HPI GD
Sbjct: 213 DPDGMCSVTLVKVAQRVPAPPGLEAGAPEGFSLLEVTIKTGRTHQIRVHLSSAGHPIAGD 272

Query: 179 TTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGL 223
             +GD   NR        +R+ LHA  LR  HP T+ PL ++A L
Sbjct: 273 DKYGDFELNRQL-ARIGLKRMFLHAWRLRLTHPVTKSPLELQAEL 316