Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., RNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  102 bits (253), Expect = 8e-27
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 19/240 (7%)

Query: 1   MLEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGV 60
           +  ++Y+D  ++ ++KPAG+ VH            +  L   + +     HRLDR TSG 
Sbjct: 4   LARLLYRDPAVLIIDKPAGLAVHAGPKGGEHLMLYLDALSFGLKRRPELAHRLDRETSGC 63

Query: 61  LVFALSSQIASEVMPMFANHEMEKTYHAIVRGWI-EEANVLDYPLKEELDKIADKFAKQD 119
           LV   +S+  + +  +FA    +KTY A+V G   E+  V+DY LK+   K   +  + D
Sbjct: 64  LVLGRTSKALAGLGELFAKGLADKTYWAVVVGKPREDQGVIDYALKKREKKFGWRM-EVD 122

Query: 120 KEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDT 179
           +   ++VT +R L            +  R   +E +P TGR HQ+R H A + HP+VGD+
Sbjct: 123 RTGLASVTQWRLLG-----------SDGRLSWLECRPLTGRTHQIRAHCAAIGHPLVGDS 171

Query: 180 THGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGWQES 239
            +G G          +  RLMLH+  +       + P+   A + E    +L   GW ES
Sbjct: 172 IYGRGTGT------LAGDRLMLHSRRIVLPFHAGKPPIAAEAPVPEHMLSVLKGCGWSES 225