Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., RluA family pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 75/239 (31%), Positives = 116/239 (48%), Gaps = 17/239 (7%)

Query: 4   IVYQDEYLVAVNKPAGMLVH--RSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVL 61
           ++Y D+ ++A+NKP G+ V       DKH   ++     D  G     +HRLD+ TSGVL
Sbjct: 94  VLYMDDEVIALNKPPGLAVQGGTGMADKHLDAWLDALCFD--GGRPKLVHRLDKDTSGVL 151

Query: 62  VFALSSQIASEVMPMFANHEMEKTYHAIVRGWIE-EANVLDYPLKEELDKIADKFAKQDK 120
           +   ++   +++   F +    K Y A+V G        +D PL +   K  +K A   +
Sbjct: 152 LLGRTANATAKLAAAFKSRSARKCYWALVAGVPRYPQGRIDAPLAKLPGKAGEKVAVDKE 211

Query: 121 EAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTT 180
           + + AVT YR +       AT K    R   +E++P+TGR HQLR H   L  PI+GD  
Sbjct: 212 DGKHAVTYYRVVD------ATLK----RAAWLELEPRTGRTHQLRAHCLLLGTPIMGDGK 261

Query: 181 HGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGWQES 239
           +G    + L      +++L LHA  +R  HP T + L + A L    +     FG+ ES
Sbjct: 262 YGG--QDALVEGTGVSRKLHLHARAVRLPHPRTGKVLEVVAPLPPHIKASFDFFGFTES 318