Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Serratia liquefaciens MT49

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 14/223 (6%)

Query: 4   IVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVF 63
           I+Y+D++L+ +NKP+G  VH            ++ LR +  + +  +HRLDR TSGVL+ 
Sbjct: 95  ILYEDDHLLLLNKPSGTAVHGGSGLSFGVIEGLRALRPE-ARFLELVHRLDRDTSGVLLV 153

Query: 64  ALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEEANVLDYPLKEELDKIADKFAKQDKEA 122
           A        +        M+K Y A+VRG W      +  PL + + +  ++  + + E 
Sbjct: 154 AKKRSALRSLHEQLRLKGMQKDYLALVRGQWQSHCKAVQAPLLKNILQSGERIVRVNSEG 213

Query: 123 QSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTHG 182
           + + T ++   + E              L++  P TGR HQ+R H  H  HPI  D  +G
Sbjct: 214 KPSETRFKVEERFE-----------HATLVKASPITGRTHQIRVHTLHAGHPIAFDDRYG 262

Query: 183 DGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDE 225
           D   +R        +RL LHA+ LRF HP T + + I A +D+
Sbjct: 263 DREFDRQL-AGTGLKRLFLHAAALRFEHPGTGETMRIEAPMDQ 304