Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) from Kangiella aquimarina DSM 16071

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 4   IVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVF 63
           I+Y+D+ L+ +NKP GM VH            ++ LR +    +  +HRLDR TSG L+ 
Sbjct: 95  ILYEDKRLIVLNKPHGMAVHGGSGMSFGVIEALRALRPE-APFLELVHRLDRDTSGCLLI 153

Query: 64  ALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEEANVLDYPLKEELDKIADKFAKQDKEA 122
           A        +        M K Y A+V G W  +   +DYPL +   K  ++  +  +  
Sbjct: 154 AKKRSTLRFLHEQLQKKLMSKQYWALVEGKWPAKLKHIDYPLAKHHLKSGERIVRVTEGG 213

Query: 123 QSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTHG 182
           + ++T++  +   +            + L+  +P TGR HQ+R H     HP+VGD  +G
Sbjct: 214 KPSLTSFSVVENFK-----------DFTLVSAEPVTGRTHQIRVHAQQAGHPLVGDPKYG 262

Query: 183 DGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLL 231
           +      F++   + RL LHA  L F      + + + A L E  Q +L
Sbjct: 263 NDEITERFKQQGLSGRLFLHAYSLTFKVTPEDKAIKVEAPLPEDLQKML 311