Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., tRNA pseudouridine(65) synthase TruC from Erwinia tracheiphila SCR3

 Score =  317 bits (811), Expect = 2e-91
 Identities = 147/239 (61%), Positives = 183/239 (76%)

Query: 1   MLEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGV 60
           MLEI+YQD++LVAVNKPAG LVHRSWLD+HE+ FVMQTLRDQI QHV+ +HRLDRPTSGV
Sbjct: 1   MLEIIYQDQWLVAVNKPAGWLVHRSWLDRHESVFVMQTLRDQIDQHVYTVHRLDRPTSGV 60

Query: 61  LVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADKFAKQDK 120
           L+ ALSS +A ++   FA H+++KTYHA+VRGW+     LDY L E+LDKIADKFA+ +K
Sbjct: 61  LLLALSSDVARQLSEQFAQHQLQKTYHAVVRGWLSGEESLDYALTEQLDKIADKFAQPEK 120

Query: 121 EAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTT 180
             QSA+T +R LA  ELP+   ++ T+RY L+E+ P++GRKHQLRRHM HLRHPI+GDT 
Sbjct: 121 APQSAITHWRSLATAELPVPVSRYQTSRYTLVELHPQSGRKHQLRRHMRHLRHPIIGDTA 180

Query: 181 HGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGWQES 239
           HGD   NR   E+F+  RLMLHAS L   HP T  PL +RAGLD  WQ ++  F WQ +
Sbjct: 181 HGDLRQNRSAAENFAMSRLMLHASALTLTHPITGAPLFLRAGLDSTWQNVIRAFDWQSA 239