Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Pseudouridylate synthases, 23S RNA-specific from Enterobacter asburiae PDN3

 Score =  330 bits (845), Expect = 2e-95
 Identities = 158/235 (67%), Positives = 182/235 (77%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVL 61
           LEI+YQDE+LVAVNKP+G LVHRSWLD+ E   VMQT+RDQIGQHVF  HRLDRPTSGVL
Sbjct: 3   LEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVL 62

Query: 62  VFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADKFAKQDKE 121
           +  LSS+    +   F  H+M+K YHAIVRGW+ EA  LDYPL EELDKIADKFA+ DK 
Sbjct: 63  LMGLSSEAGRLLSQQFEQHQMQKRYHAIVRGWLTEAATLDYPLVEELDKIADKFARDDKG 122

Query: 122 AQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTH 181
            Q AVT YR +A  E+P+AT KF TTRY L+E+ PKTGRKHQLRRH+AHLRHPI+GD+ H
Sbjct: 123 PQPAVTDYRGMATTEMPVATSKFPTTRYSLVELLPKTGRKHQLRRHLAHLRHPIIGDSKH 182

Query: 182 GDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGW 236
           GD   NR   EHF   RLMLHASEL   HP+T +PL IRAGLD+VW   LS+FGW
Sbjct: 183 GDLRQNRSAAEHFGCHRLMLHASELSLTHPFTGEPLTIRAGLDDVWMQALSQFGW 237