Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA from Escherichia coli ECOR38

 Score = 92.8 bits (229), Expect = 5e-24
 Identities = 78/234 (33%), Positives = 107/234 (45%), Gaps = 40/234 (17%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVL 61
           L I+YQD++++ VNKP+G+L     L++H+   + +  RD        +HRLD  TSGV+
Sbjct: 14  LVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDY--PQAESVHRLDMATSGVI 71

Query: 62  VFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEAN-VLDYPLKEELDKIADKFAKQDK 120
           V AL+     E+   F   E +K Y A V G    A  ++D PL      I D       
Sbjct: 72  VVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPL------ICD------- 118

Query: 121 EAQSAVTAYRPLAKVELPIATGKFATTRYCLME----------MQPKTGRKHQLRRHMAH 170
                    RP  KV     TGK A T Y ++E          ++P TGR HQLR HM  
Sbjct: 119 ------WPNRPKQKV--CYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLA 170

Query: 171 LRHPIVGDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLD 224
           L HPI+GD  +       +      A RL+LHA  L   HP     +  +A  D
Sbjct: 171 LGHPILGDRFYASPEARAM------APRLLLHAEMLTITHPAYGNSMTFKAPAD 218