Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Pseudouridylate synthases, 23S RNA-specific from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  211 bits (537), Expect = 1e-59
 Identities = 105/239 (43%), Positives = 152/239 (63%), Gaps = 13/239 (5%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETE-FVMQTLRDQIGQHVFPLHRLDRPTSGV 60
           LEI+++DE+ +AVNKPAG++VHRS + K +   + MQ LRDQ+G HV+PLHR+DRPTSGV
Sbjct: 4   LEILFEDEHYIAVNKPAGVMVHRSSIAKDDDPIYAMQVLRDQMGHHVYPLHRIDRPTSGV 63

Query: 61  LVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEAN-VLDYPLKEELDKIADKFAKQD 119
           L FA +  +       F N  + K+Y  +VRG+ +EA  ++DYPL++ L K         
Sbjct: 64  LWFARNPDVVPAFQEQFINQNIRKSYLTVVRGYTKEAKGIIDYPLRKNLKK--------- 114

Query: 120 KEAQSAVTAYRPLAKVELPIATG-KFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGD 178
            E Q A T Y  + +VE+P  +  +  T+RY L+   P TGR HQ+RRH+AH R+ I+GD
Sbjct: 115 -ELQEAQTEYERIGQVEIPFQSSPRHDTSRYSLVRAHPLTGRMHQIRRHLAHERNYIIGD 173

Query: 179 TTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGWQ 237
            THGD   NR FR HF    ++LHA    F HP T  P+++ A L + ++ +++ FGW+
Sbjct: 174 NTHGDNRQNRFFRMHFHMHHMLLHARSTAFDHPITGAPVLVTAPLPDYFEKIVTTFGWK 232