Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., Pseudouridylate synthases, 23S RNA-specific from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  106 bits (264), Expect = 5e-28
 Identities = 72/229 (31%), Positives = 119/229 (51%), Gaps = 25/229 (10%)

Query: 4   IVYQDEYLVAVNKPAGMLVHRSWL-DKHETEFVMQTLRDQIGQ----HVFPLHRLDRPTS 58
           +VY+D +L+ VNK AG+LV      DK  T++    + ++  +     + P+HR+DRP S
Sbjct: 8   VVYEDNHLLVVNKHAGVLVQGDHTGDKTLTDYCKAYIAEKYDKPGAVFLHPVHRIDRPVS 67

Query: 59  GVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEE--ANVLDYPLKEELDKIADKFA 116
           G++VFA +S+    +M +F   E+ K Y AIV+   +E    +  Y  K+E   +   + 
Sbjct: 68  GLVVFARTSKALERMMVLFKKREVHKVYWAIVKKRPKEEIGKLTHYLKKDESRNVTTAYD 127

Query: 117 KQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIV 176
           K+ + ++ A   Y+ L K+             + L+E++PKTGR HQ+R  +A +  PI 
Sbjct: 128 KEVEGSKRAELDYKRLGKL-----------NDHWLVEVRPKTGRPHQIRVQLAAMGCPIR 176

Query: 177 GDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDE 225
           GD  +G       F +      + LHA  L F+HP  ++ L +RA L E
Sbjct: 177 GDLRYG-------FSKPNPDASINLHAFHLIFVHPVKKEKLYLRAALPE 218