Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., 23S rRNA pseudouridine(955,2504,2580) synthase from Escherichia coli BL21

 Score =  100 bits (248), Expect = 5e-26
 Identities = 72/224 (32%), Positives = 112/224 (50%), Gaps = 14/224 (6%)

Query: 4   IVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVF 63
           I+Y+D++++ +NKP+G  VH            ++ LR +  + +  +HRLDR TSGVL+ 
Sbjct: 95  ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPE-ARFLELVHRLDRDTSGVLLV 153

Query: 64  ALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEEANVLDYPLKEELDKIADKFAKQDKEA 122
           A        +        M+K Y A+VRG W      +  PL + + +  ++  +  +E 
Sbjct: 154 AKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEG 213

Query: 123 QSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTHG 182
           + + T +    KVE   A   FAT    L+   P TGR HQ+R H  +  HPI  D  +G
Sbjct: 214 KPSETRF----KVEERYA---FAT----LVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYG 262

Query: 183 DGVHNRLFREHFSA-QRLMLHASELRFMHPYTQQPLVIRAGLDE 225
           D   +R   E  +   RL LHA+ L+F HP T + + I A +DE
Sbjct: 263 DREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDE 306