Pairwise Alignments

Query, 345 a.a., DUF3549 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  139 bits (349), Expect = 1e-37
 Identities = 105/355 (29%), Positives = 178/355 (50%), Gaps = 26/355 (7%)

Query: 4   IRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYWNE- 62
           I +++  L ++G +Y++FDLGRR++  D++ F ++E G    P+P Q+HA F IV+WN+ 
Sbjct: 6   INSISEFLLHAGTEYKVFDLGRRLEPTDSQTFLEIENGSAYAPYPRQQHAWFGIVFWNKN 65

Query: 63  -QRQPWIWMLKFALDERGLLQQADVGQFIQYLLEAMGSRLHQSLTE--EQQQKLANNPYT 119
              Q +IW +K  LDE+GL+  A    F++ +++A+G    QS+ E  E  Q L +NPY+
Sbjct: 66  ASTQHYIWFVKLPLDEQGLVVAAARNHFLEIIVDALG----QSVAEDTENAQTLPDNPYS 121

Query: 120 FKPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFSGGLGWDKWHTVGLQGITDLCARLEQ 179
           F P++ +LA  ++ ++  L    S+  +  + Y       D W  + +Q + D    L  
Sbjct: 122 FVPNQSQLAQFNALVKRTLNQPLSEESQKVEAYIQAPQLVD-WQQISMQSVADFVHSLSH 180

Query: 180 EQNGVLLRKAL---THLPAQP-LYAVLGALEHVTLPEKLAKRLSELAEAEVKASDPDLFL 235
                +L +A+   T L +Q  L  ++   E V+LPE L      LA   ++    D   
Sbjct: 181 HPKQDVLTQAIETNTSLYSQVFLNTLMEMSESVSLPENL------LAAYLIEIDKSDDIN 234

Query: 236 LAALVRALAGAPANILDATCDAILASPAICHPEVLIALAGRSWMSLENSGRAQRFLIRLA 295
           LAAL     G+    ++     +L S      ++L  +A R +  +E       FL + A
Sbjct: 235 LAALRGTSEGSFHPTINNKLLELLKSEKSQRLDILSVIAARHFEQMEPL-LLSAFLEQAA 293

Query: 296 QTQNQ-----PLFNQLFADVVMLPALRGVMLPLLHASPSPE-LAQALEQLQQMTR 344
               +      LF   F+D+V +P LR  +L LLH+  +P+ L+ A +QL    R
Sbjct: 294 NVDEKEGHKGALFAGFFSDLVQVPKLRRQVLTLLHSKANPQILSNAFQQLFAQAR 348