Pairwise Alignments

Query, 214 a.a., DUF533 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., FIG004088: inner membrane protein YebE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  105 bits (263), Expect = 5e-28
 Identities = 74/204 (36%), Positives = 113/204 (55%), Gaps = 13/204 (6%)

Query: 7   LNQALSSDLVKKGSEQLKNLGQDKSQLGALGAGALGGGLLGMLLGSKKS----AKWGKSA 62
           LNQ L S L +KG+    +  Q  ++L  L  GALGG L G+L+ +K S     K+G  A
Sbjct: 5   LNQ-LQSLLGQKGASASPSGEQGLNKL--LVPGALGG-LAGLLVANKSSRKLLTKYGTGA 60

Query: 63  LKVGGAAALGALAYKVYNDWNAKQNGQSAPTPFDESNP---RHELIILKAMIAAAKADGH 119
           L VGG A  G++ +  Y D   +   Q  P    +S P   R E +IL A++ AAK+DGH
Sbjct: 61  LLVGGGAVAGSVLWNKYKD-KVRAAHQGEPQFGSQSTPLDVRTERLIL-ALVFAAKSDGH 118

Query: 120 VDEQEMARIQQAIEELGADNQVQQLVEQELRKPLDPSEIARFAQNPAQASELYLASLLIA 179
           +D +E A I+  + E G + Q +  +E+ + +PLDP  +A+  +N  +A E+Y  S    
Sbjct: 119 IDAKERAAIEHQLRESGVEEQGRVFIEKAIEQPLDPQRLAQGIRNEEEALEIYFLSCAAI 178

Query: 180 DEQNFMEKAYLNELAKQLGLDDQL 203
           D  +FME++YLN L   L +  ++
Sbjct: 179 DIDHFMERSYLNALGDALKIPQEV 202