Pairwise Alignments

Query, 214 a.a., DUF533 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., DUF533 family inner membrane protein from Escherichia coli BL21

 Score =  107 bits (268), Expect = 1e-28
 Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 26/205 (12%)

Query: 3   LKSLLNQALSSDLVKKGSEQLKNLGQDKSQLGALGAGALGGGLLGMLLGSKKS----AKW 58
           L+SLL Q+ SS      S   + LG+       L  GALGG L G+L+ +K +     K+
Sbjct: 8   LQSLLGQSSSST----SSSADQGLGK------LLVPGALGG-LAGLLVANKSARKLLTKY 56

Query: 59  GKSALKVGGAAALGALAYKVYNDWNAKQNGQSAP------TPFDESNPRHELIILKAMIA 112
           G +AL VGG A  G + +  Y D   +   Q  P      TP DE   R    ++ A++ 
Sbjct: 57  GTNALLVGGGAVAGTVLWNKYKD-KIRAAHQDEPQFGAQSTPLDERTER----LILALVF 111

Query: 113 AAKADGHVDEQEMARIQQAIEELGADNQVQQLVEQELRKPLDPSEIARFAQNPAQASELY 172
           AAK+DGH+D +E A I Q + E G + Q + L+EQ + +PLDP  +A   +N  +A E+Y
Sbjct: 112 AAKSDGHIDAKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATGVRNEEEALEIY 171

Query: 173 LASLLIADEQNFMEKAYLNELAKQL 197
             S    D  +FME++YLN L   L
Sbjct: 172 FLSCAAIDIDHFMERSYLNALGDAL 196