Pairwise Alignments

Query, 145 a.a., IS200/IS605 family transposase IS1004 from Vibrio cholerae E7946 ATCC 55056

Subject, 143 a.a., IS200/IS605-like element IS609 family transposase from Escherichia coli ECRC101

 Score = 65.9 bits (159), Expect = 2e-16
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 2/129 (1%)

Query: 3   DYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDCEVLELNVQPDHV 62
           D R   H  +    H+V+  ++R +I   +  ++L      +C   + E++E++ +PDHV
Sbjct: 11  DIRRGRHCVFLMHVHLVFVTRYRRQIFDHDATEKLRTYFSKVCADFEAELVEMDGEPDHV 70

Query: 63  HLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIR-KKLWGNHFWARGYFVDTV-GVNEE 120
           HL+   PPK++IS+L+  LKG S   L    P I  +  +    W+ GYF  +  G    
Sbjct: 71  HLLINYPPKLAISSLVNSLKGVSGRLLRRDRPDIAVRYYYKGVLWSPGYFASSCGGAPIS 130

Query: 121 IIRRYVRHQ 129
            IR+Y+  Q
Sbjct: 131 AIRQYIEQQ 139