Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 67.0 bits (162), Expect = 8e-16
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 4/105 (3%)

Query: 35  LEKIRERGVLRVGTLN-NPLSYYIGPDGP--TGLDYELAREFAKELGVKLEMKPAYRLSS 91
           L+ +R+ GVLRV   + NP   YI P      G D +LA EFAK LGVK+E+ P    + 
Sbjct: 29  LDDVRKAGVLRVAAFDGNPPFGYIDPASKKQVGHDIDLATEFAKSLGVKIELVPTNPANR 88

Query: 92  LFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKG 136
           + P L +G+VD++ A  + ++ER K       Y+ V QQ + KKG
Sbjct: 89  I-PLLTSGKVDVVFASFTITDERAKAVDFTTPYFLVGQQFLAKKG 132