Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., membrane-bound lytic murein transglycosylase F from Pseudomonas putida KT2440

 Score =  337 bits (864), Expect = 6e-97
 Identities = 191/463 (41%), Positives = 278/463 (60%), Gaps = 19/463 (4%)

Query: 12  ALWLGLLSL-LLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELA 70
           A WL    L LL+G  +  E  S LE+++E GVLRV T N+P +Y+   +G TG +YEL 
Sbjct: 12  AKWLLATGLFLLLGACV--EKPSTLERVKEDGVLRVITRNSPATYFQDRNGETGFEYELV 69

Query: 71  REFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAA-GLSQSEERLKDFRAGPAYYYVSQ 129
           + FA +LGVKL+++ A  L  L+ AL      ++AA GL  SE R    R    Y  V+ 
Sbjct: 70  QHFADDLGVKLQIETADNLDELYDALGKPSGPVLAAAGLVSSERRKTQVRYSHPYLEVTP 129

Query: 130 QVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFHV 189
           QV+Y+ G  RP   K LV ++  +LK +           SH +     K+Q YP  Q+  
Sbjct: 130 QVIYRNGRPRPTGAKGLVGKKIMVLKGS-----------SHADQLAELKKQ-YPALQYEE 177

Query: 190 DSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRSDDE 249
               +V DLL+ V +G++  T+ DS E++++Q  +P +  AF+L E +   W +   +D 
Sbjct: 178 SDAVEVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGETRDQRWAVAAGEDN 237

Query: 250 SLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYS 309
           SL   + E+    +++G L  L+++Y GH+    YV    F + L  RLP++   F+ Y+
Sbjct: 238 SLLNEINEYLDKAQKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPKYEKHFKSYA 297

Query: 310 A--EFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGV 367
              + DWRL+AA+ YQES W P   S TGVRGLMMLT  TA+++GVS+RLDP QSI+GG 
Sbjct: 298 KVEQVDWRLLAAIGYQESMWQPEVTSKTGVRGLMMLTQRTAQAMGVSNRLDPRQSIQGGA 357

Query: 368 EYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQ 427
           +Y  ++ E + DSI E ++ WFALA+YN+G GH+ DAR L K +  +P+ W DVK  LP+
Sbjct: 358 KYFMKIKEELDDSIKEPDRTWFALAAYNVGGGHLEDARTLAKREKLNPNKWLDVKKMLPR 417

Query: 428 LQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQL 470
           L QK+++ QT+YGYARG E  ++V NIRRYY  I+  + Q QL
Sbjct: 418 LAQKQWYRQTKYGYARGGEPVHFVANIRRYY-DILTWVTQPQL 459