Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., Membrane-bound lytic murein transglycosylase F from Pseudomonas sp. RS175

 Score =  340 bits (871), Expect = 9e-98
 Identities = 190/478 (39%), Positives = 290/478 (60%), Gaps = 21/478 (4%)

Query: 21  LLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKELGVK 80
           +L GC    E  + LE+++E GVLRV T N+P +Y+   +G TG +YEL + FA +LGV+
Sbjct: 1   MLSGCV---EKPNTLERVKEDGVLRVVTRNSPATYFQDRNGETGFEYELVKRFADDLGVE 57

Query: 81  LEMKPAYRLSSLFPAL--KNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDW 138
           L+++ A  L  LF  +   NG V + AAGL  S++R K  R   +Y  V+ QV+Y+ G  
Sbjct: 58  LKIETADNLDDLFSQIGKPNGPV-LAAAGLVSSDQRKKQVRFSHSYLEVTPQVIYRNGQS 116

Query: 139 RPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDL 198
           RP     L  ++  +LK +           +H E     KQQ YP  ++      +V DL
Sbjct: 117 RPTDAAALAGKKIMVLKGS-----------THAEQLAQLKQQ-YPGIEYEESDAVEVVDL 164

Query: 199 LKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRSDDESLYALMIEF 258
           L+ V +G++  T+ DS EV+++Q  +P +  AF+L + +  SW +   +D SL   +  +
Sbjct: 165 LRMVDEGQIDLTLVDSNEVAMNQVYFPNVRVAFDLGDARSQSWAVAPGEDNSLLNEINGY 224

Query: 259 FGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSAE--FDWRL 316
              ++++G L  L+++Y GH+    Y+    F + L  RLP++   F+ Y+ +   DWRL
Sbjct: 225 LDKVQKNGTLQRLKDRYYGHVDVLGYMGATTFAQHLQQRLPKYEQHFKTYAKKEKIDWRL 284

Query: 317 VAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMMER 376
           +AA+ YQES W P   S TGVRGLMMLT  TA+++GVS+RLDP+QSI GG +YL  M E+
Sbjct: 285 LAAIGYQESLWQPAVTSKTGVRGLMMLTQNTAQAMGVSNRLDPKQSIMGGAKYLAYMKEQ 344

Query: 377 VPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQLQQKKYFTQ 436
           + +SI E ++ WFALA+YN+G GH+ DAR+L   +G +P+ W DVK  LP+L QK+++++
Sbjct: 345 LDESIQEPDRTWFALAAYNVGSGHLDDARKLAAKEGLNPNKWLDVKKILPRLSQKQWYSK 404

Query: 437 TRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIEDLTVIALDEEFFNEEA 494
           TRYGYARG E  ++V NIRRYY  I+  + Q QL     +  +L V  +D+   N+E+
Sbjct: 405 TRYGYARGGEPVHFVANIRRYY-DILTWVTQPQLEGNQVAEGNLHVPGVDKSKPNQES 461