Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., cystine ABC transporter substrate-binding protein from Serratia liquefaciens MT49

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 45/283 (15%)

Query: 11  RALWLGLLSLLLVGCQIDSEPKSE--LEKIRERGVLRVGTLNN--PLSYYIGPDGP-TGL 65
           R L LG++S+ L          ++  LE+++  G L VG      P S+  G DG  TG 
Sbjct: 8   RQLLLGVMSVALTAGLSTQTYAADNLLEQVKHHGTLVVGLEGTYPPFSFQ-GEDGKLTGF 66

Query: 66  DYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYY 125
           + + A   A+ LGVK ++ P  +   +  +L +  +D++   ++ S+ER K +     Y 
Sbjct: 67  EVDFANALAEHLGVKAKLNPT-KWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPYT 125

Query: 126 YVSQQVVYKKGD----WRPRSFK------QLVERQQTLLKDNPELAFFSVVDDSHFEHTL 175
               Q + KKG+     +P   K       L    +  L+DN +       DD       
Sbjct: 126 VSGIQALVKKGNEGTITKPEDLKGKKVGVGLGTNYEQWLRDNVQGVDVRTYDDD------ 179

Query: 176 LAKQQKYPDFQFHVDSNSDVNDLL-KKVSQGELLFTMADSVEVSLSQRIYPELAAAFELT 234
                KY D +        +N +L  +++  +L+    D++ V+           AF   
Sbjct: 180 ---PTKYQDLRV-----GRINAILVDRLAALDLVKKTGDTLAVA---------GPAFSRQ 222

Query: 235 EDQPISWFIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIG 277
           E    S    R ++  L A + +    +++ G LA + EK+ G
Sbjct: 223 E----SGVAVRKNNPELLAAINQAIAEMQKDGTLAKISEKWFG 261