Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., Transglycosylase, Slt family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  458 bits (1178), Expect = e-133
 Identities = 231/468 (49%), Positives = 321/468 (68%), Gaps = 16/468 (3%)

Query: 7   KLPIRALWLGLLSLLLVGCQIDSEP-----KSELEKIRERGVLRVGTLNNPLSYYIGPDG 61
           KL I  L++G+L+LLL      S P     ++ +  I+ RGVLRV T+++PL+Y +    
Sbjct: 3   KLKINYLFIGILTLLLAAALWPSIPWFGKTENHIAAIQARGVLRVSTIDSPLTYSVINGK 62

Query: 62  PTGLDYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAG 121
             GLDYELA++FA  LGVKL++     +S LF  L NG  D++AAGL     R+K+++ G
Sbjct: 63  KYGLDYELAQQFANYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYDSARVKNYQPG 122

Query: 122 PAYYYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQK 181
           P YY VSQQ+VY+ G +RPRS   + E Q T+   +       VV+D         K+ K
Sbjct: 123 PMYYSVSQQLVYRVGQYRPRSLATVNENQLTIAPGHV------VVNDLQ-----RLKETK 171

Query: 182 YPDFQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISW 241
           +PD  + VD       LL++V  G+L +T+ADSV +SL QR++PELA A ++T++QP++W
Sbjct: 172 FPDLSWKVDDKKGSTTLLEEVISGKLDYTIADSVAISLFQRVHPELAVALDVTDEQPVTW 231

Query: 242 FIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRW 301
           F R  DD +L A +++FF ++ + G LA +EEKY+GH   FDYVDTR+F+RA+D  LP  
Sbjct: 232 FSRLDDDNTLSAALLDFFNSINEDGSLARIEEKYLGHGDDFDYVDTRSFLRAVDNVLPEL 291

Query: 302 TPLFQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQ 361
            PLF+KY+ E DWRL+AA++YQESHW+P A SPTGVRGLMMLT  TA+S+G++DR D EQ
Sbjct: 292 EPLFKKYAKEIDWRLLAAISYQESHWDPLATSPTGVRGLMMLTKNTAQSLGLTDRTDAEQ 351

Query: 362 SIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADV 421
           SI GG  YL  MM +VP+++ E E+IWFALA+YN+GY HM+DAR LT     +PDSW DV
Sbjct: 352 SISGGARYLEDMMAKVPETVPEDERIWFALAAYNMGYAHMLDARSLTVKTKGNPDSWTDV 411

Query: 422 KDRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQ 469
           K RLP L QK Y+++  YGYARG EA  YVENIR+Y  S++G+L++++
Sbjct: 412 KQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKE 459