Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Kangiella aquimarina DSM 16071

 Score =  407 bits (1047), Expect = e-118
 Identities = 217/517 (41%), Positives = 325/517 (62%), Gaps = 22/517 (4%)

Query: 8   LPIRALWLGLL---SLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTG 64
           L I+ L L L+   +L L  C    EPK++LE+++++G ++V T  +P + Y+G +G +G
Sbjct: 5   LTIKLLGLALVIVSALFLTSCS--EEPKNQLERVQQQGYIKVYTRISPTTMYVGEEGFSG 62

Query: 65  LDYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAGPAY 124
            +Y+L + FA ELGV++++     ++ +   + +G  D  AAGL+ +++R +  R GP Y
Sbjct: 63  FEYDLVKLFADELGVRVQIVTENDIAKILREVSSGRADFAAAGLTVTQQREEFLRFGPPY 122

Query: 125 YYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPD 184
             ++ ++VYK+G+ RPR F Q V++  T+           V + SH E  LL  Q+ YP+
Sbjct: 123 QEITSKLVYKQGNDRPRDFSQ-VDKNLTV-----------VANSSHSEE-LLKAQKDYPN 169

Query: 185 FQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIR 244
             +   S+    DLL  V  G   +T+ DS E+ L++++ PELA AF +TE +P++W   
Sbjct: 170 LSWTERSDLTPQDLLDGVLDGTFDYTIVDSNELQLARQVQPELAVAFSITEPEPLAWAFP 229

Query: 245 RSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPL 304
           +  D SLY   IEFF  ++  G LA L E+Y GH+  FDYV  R F+RA++ +L ++ P 
Sbjct: 230 KDSDNSLYIKAIEFFSKIRGDGTLAYLTERYYGHLSKFDYVGNREFLRAIEDKLDKYRPY 289

Query: 305 FQKYSA-EFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSI 363
           F + +A + DWRL+AA+ YQESHW P+A+SPTGVRGLMMLTL TA+ +GV +RLD EQSI
Sbjct: 290 FYEAAANDLDWRLLAAMGYQESHWEPHARSPTGVRGLMMLTLNTAKQLGVKNRLDAEQSI 349

Query: 364 RGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKD 423
            GG +YLR + E++PD I E ++ WFALA+YN+GYGH+ DARRL +  GA+PD W DVK+
Sbjct: 350 LGGADYLRLVKEKIPDRIEEPDRTWFALAAYNVGYGHLEDARRLAEGDGANPDKWLDVKE 409

Query: 424 RLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIEDLT-V 482
            LP L+QKK++++TRYGYARGDE   YV NIR YYQ +    E +  A G E ++  T  
Sbjct: 410 YLPLLRQKKWYSRTRYGYARGDEPVKYVNNIRMYYQVLKQVAEPK--AGGSELVDPETES 467

Query: 483 IALDEEFFNEEANREILDEEAEALESESLENSESSAE 519
           +  DE+  +   + E +    EA+     +  E   E
Sbjct: 468 MQEDEDIGDHRQDGENVVGTDEAIAETESDKPEDDTE 504