Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Enterobacter asburiae PDN3

 Score =  446 bits (1148), Expect = e-130
 Identities = 231/488 (47%), Positives = 326/488 (66%), Gaps = 18/488 (3%)

Query: 7   KLPIRALWLGLLSLLLVGCQIDSEP-----KSELEKIRERGVLRVGTLNNPLSYYIGPDG 61
           KL I  L +G+++LLL      S P     ++ +  I+ERG LRV TLN+PL Y      
Sbjct: 3   KLKINYLLIGIVTLLLAVALWPSIPWFGKAENRIAAIQERGELRVSTLNSPLIYSDVNGK 62

Query: 62  PTGLDYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAG 121
             GLDYELA++FA  LGVKL++     ++ LF  L N + D++AAGL  + ER K+++ G
Sbjct: 63  IIGLDYELAQQFADYLGVKLKITVRQNINELFDDLDNDDADMLAAGLVYNSERSKNYQPG 122

Query: 122 PAYYYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQK 181
           P YY VSQQ+VY+ G  RPRS   + +RQ T+   +       V+DD         K++K
Sbjct: 123 PTYYSVSQQLVYRVGSLRPRSLASINDRQLTIAPGHV------VIDDLRE-----LKEKK 171

Query: 182 YPDFQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISW 241
           YPD  + VD      +LL++V   ++ +T+ADSV +SL QR++PE+A A ++T++QP++W
Sbjct: 172 YPDLSWTVDPKLGTTELLEQVKDQKVPYTIADSVAISLFQRVHPEIAVALDVTDEQPVTW 231

Query: 242 FIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRW 301
           F +  DD++  A M++FF  + + G LA LEEKY+GH   FDYVDTR+F+RA+D+ LP  
Sbjct: 232 FSQLDDDQTFSAAMLDFFNTINEDGTLARLEEKYLGHGDDFDYVDTRSFLRAVDSVLPDL 291

Query: 302 TPLFQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQ 361
            PLF+KY+ E DW+L+AA++YQESHW+  A SPTGVRGLMMLT  TA S+GV+DR D EQ
Sbjct: 292 QPLFEKYAQEIDWKLLAAISYQESHWDTQATSPTGVRGLMMLTKNTALSLGVNDRTDAEQ 351

Query: 362 SIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADV 421
           SI GG  YL+ MM +VP+++ E E+IWFALA+YN+GY HM+DAR LT     +PDSW+DV
Sbjct: 352 SISGGARYLQDMMAKVPETVPEEERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWSDV 411

Query: 422 KDRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHL--EQRQLATGDESIED 479
           K RLP L QK ++ +  YGYARG EA  YVENIR+Y  S++G+L  ++++     +  + 
Sbjct: 412 KQRLPLLSQKPWYNKLTYGYARGHEAYAYVENIRKYQISLVGYLLEKEKEATEAKQLAQS 471

Query: 480 LTVIALDE 487
             V+A DE
Sbjct: 472 YPVVAPDE 479