Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., Membrane-bound lytic murein transglycosylase F precursor from Alteromonas macleodii MIT1002

 Score =  397 bits (1021), Expect = e-115
 Identities = 210/467 (44%), Positives = 294/467 (62%), Gaps = 7/467 (1%)

Query: 6   YKLPIRALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGL 65
           YK  ++   + +LS+ ++ C + S P + L  + ER  +RVGT+    ++Y G +GP G 
Sbjct: 6   YKKRLKLQLIIILSIAVMSCGVPSVPTA-LSSLLERESIRVGTVYGAGTFYNGAEGPQGF 64

Query: 66  DYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYY 125
           +YEL   FA  LGV L++ P Y    +   L+ G +DI+A G + +      F  GPAY 
Sbjct: 65  EYELLAGFADYLGVTLDLYPFYSYEVMLEQLEEGNLDIVATGDAVTPSLKSRFAYGPAYQ 124

Query: 126 YVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDF 185
           +V Q++V++ G  RPR   +L     T+   +      +++D    E T      + P  
Sbjct: 125 HVQQELVFQAGTSRPRDLLELDAPIVTVAGSSQAHLLSNLLD----EVTDQTSDSESPVI 180

Query: 186 --QFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFI 243
             Q     +SD  +LL++V+ G++ +T+ADS  ++L +R YP LA A  L ED P++W +
Sbjct: 181 KTQLVTTEDSDSEELLQQVANGDIAYTVADSNRLALQRRRYPNLAVAKTLNEDMPMAWAL 240

Query: 244 RRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTP 303
               D+S+ A +IE+FG + QSG+   LE+KY GHI  FDYVD+RAF  A +T L ++ P
Sbjct: 241 PLHQDDSVKAALIEYFGTVHQSGWFTVLEDKYFGHIRQFDYVDSRAFNYAAETALAQYKP 300

Query: 304 LFQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSI 363
           LFQ+Y+ E DWRL+AA++YQESHW+  A S TGVRGLMMLT+ TA    V DR DPEQSI
Sbjct: 301 LFQQYAGELDWRLLAAMSYQESHWDSDAISRTGVRGLMMLTMDTASDWNVDDRTDPEQSI 360

Query: 364 RGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKD 423
           RGG  Y   ++ R+P  ISE ++ W A+ASYNIG GH+ DAR LT+ QG +PD W DVK 
Sbjct: 361 RGGSRYFASLLNRIPARISEPDRTWMAMASYNIGMGHLEDARILTEQQGGNPDLWVDVKR 420

Query: 424 RLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQL 470
           RLPQL+QKKY+  TRYGYARGDEA  YVENIRRYY S++   EQ ++
Sbjct: 421 RLPQLRQKKYYRTTRYGYARGDEALQYVENIRRYYDSLVWLDEQGKI 467