Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., Membrane-bound lytic murein transglycosylase F from Acinetobacter radioresistens SK82

 Score =  122 bits (306), Expect = 2e-32
 Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 34/335 (10%)

Query: 147 VERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGE 206
           VE   TL KD   +  F         + L+    +  + +  + + +D    LK V+QG+
Sbjct: 59  VESPTTLFKDGKIMYGFG--------YDLVRNYAQNLNVRLELKTVADNATALKWVAQGK 110

Query: 207 LLFTMADSVEVSLSQRIYPELAAAFELTE-------DQPISWFIRRSDDESLYALMIEFF 259
               M  +   ++ +      +A+   T        +  ++W  ++++ E L A    + 
Sbjct: 111 ANMAMTTADFNTIEKHQLTSFSASCGDTTSLVKNGLNPALNWVFKQAE-EPLAATASGYI 169

Query: 260 GNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSAEFD--WRLV 317
              KQ+G +  L   Y  ++   D   T    R L  R+P +   FQ+ +  +D  W L+
Sbjct: 170 CQGKQNGAIRQLASFYNRNVVQPDAWKT--IQRDLSKRMPIYKASFQQSAERYDLDWHLL 227

Query: 318 AALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMMERV 377
           AA+ YQES+  P + SPTGVRGLMMLT  TA+++GV +R DP QSI+GG +Y   M+++ 
Sbjct: 228 AAIGYQESYLKPNSVSPTGVRGLMMLTSSTAKAMGVQNRTDPHQSIQGGAKYYDLMLDKF 287

Query: 378 PDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQLQQKKYFTQT 437
            D +   ++ W+AL +YN+G G +   ++  + QG +P++W ++ D L + Q        
Sbjct: 288 SD-VPYPDRNWYALVAYNMGPGAVGQIQKRIEIQGRNPNNWVNLYDYLERHQTSN----- 341

Query: 438 RYGYARGDEARNYVENIRRYYQSIIGHLEQRQLAT 472
                R  +A  YV  IR Y +    H+++  L T
Sbjct: 342 ----GRYRQAVQYVTRIRAYLE----HIKKSDLVT 368



 Score = 34.7 bits (78), Expect = 6e-06
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 8  LPIRALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDY 67
          LP+R L L   + L+    I++   S+   +     L V T+ +P + +       G  Y
Sbjct: 20 LPVRLLVLS--TALVPWHNINASKASQYNSVVNTNTLTVVTVESPTTLFKDGKIMYGFGY 77

Query: 68 ELAREFAKELGVKLEMK 84
          +L R +A+ L V+LE+K
Sbjct: 78 DLVRNYAQNLNVRLELK 94