Pairwise Alignments

Query, 184 a.a., general secretion pathway protein GspH from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., KEGG: type IV fimbrial biogenesis protein FimT from Variovorax sp. SCN45

 Score = 49.3 bits (116), Expect = 4e-11
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 8/155 (5%)

Query: 17  RGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQGFLIQAKSEAVFRNQDL 76
           RGFTL+E+++ VA++T +L  A P+FS + ++ ++  +A+ L   +  A+SEA  R +  
Sbjct: 20  RGFTLVEMMVVVALMTILLAIALPSFSGLIEKYRVEGMASALTASVSHARSEAARRGKT- 78

Query: 77  WVHIQGLPSITGQ-WQLVLSSVSDVAAIDASNTVALLQGQRYQNVFVSKTNTLTEVKFDH 135
            V IQ     +G+ W    S   D   +    T  L +    + V V +      + FD 
Sbjct: 79  -VTIQARAGCSGRDW----SCGWDTLVVSGDATETLRRQDPDKRVAVERRGASGAMSFD- 132

Query: 136 VMGNPQEAGSLFIKPSESAADSIKVTVHNRAGRIK 170
            MG+   A   F     + + +      +  GR++
Sbjct: 133 AMGSSDFARFSFYPVGNADSSNAATVCISLGGRLR 167