Pairwise Alignments

Query, 184 a.a., general secretion pathway protein GspH from Vibrio cholerae E7946 ATCC 55056

Subject, 149 a.a., prepilin-type N-terminal cleavage/methylation domain from Kangiella aquimarina DSM 16071

 Score = 45.8 bits (107), Expect = 3e-10
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 19  FTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQGFLIQAKSEAVFRNQDLWV 78
           FTL+EL+ T+AVL  +L  A P    +  + ++   AN+    +  A+SEA+ R Q   V
Sbjct: 8   FTLIELITTIAVLAILLAIAVPGMQNMVLENRLVAFANDFSNSVSLARSEALTRRQS--V 65

Query: 79  HIQGLPSI-TGQWQLVLSSVSDV 100
            I+ + +  +  W++++   S+V
Sbjct: 66  SIKPVDNAWSNGWEVIIDDTSEV 88